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Resource StructureMap/FHIR Server from package hl7.fhir.uv.omop#current (78 ms)

Package hl7.fhir.uv.omop
Type StructureMap
Id Id
FHIR Version R5
Source http://hl7.org/fhir/uv/omop/https://build.fhir.org/ig/HL7/fhir-omop-ig/StructureMap-MedicationMap.html
Url http://hl7.org/fhir/uv/omop/StructureMap/MedicationMap
Version 0.1.0
Status draft
Date 2025-06-26T15:12:06+00:00
Name MedicationMap
Title Mapping MedicationStatement resource to DrugExposure OMOP Domain
Experimental False
Realm uv
Authority hl7
Description MappingMedicationStatementresourcetoDrugExposureOMOPDomain

Resources that use this resource

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Resources that this resource uses

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Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: StructureMap MedicationMap

/// url = 'http://hl7.org/fhir/uv/omop/StructureMap/MedicationMap'
/// name = 'MedicationMap'
/// title = 'Mapping MedicationStatement resource to DrugExposure OMOP Domain'
/// status = 'draft'

uses "http://hl7.org/fhir/StructureDefinition/MedicationStatement" alias MedState as source
uses "http://hl7.org/fhir/uv/omop/StructureDefinition/DrugExposure" alias DrugExpTable as target

group MedExposure(source src : MedState, target tgt : DrugExpTable) {
  src.medication : CodeableReference as s -> tgt then {
    s.concept as scs -> tgt then {
      scs.coding as sc -> tgt then {
        sc.code as a -> tgt.drug_concept_id = a;
      };
    };
  }; // src.id as id -> tgt.drug_exposure_id = cast(id, "integer");
  src.effective : dateTime as edt ->  tgt.drug_exposure_start_datetime = edt,  tgt.drug_exposure_start_date = cast(edt, 'date');
  src.effective : Period as s -> tgt then {
    s.start as fps ->  tgt.drug_exposure_start_datetime = fps,  tgt.drug_exposure_start_date = cast(fps, 'date');
  };
  src.effective : Period as s -> tgt then {
    s.end as fpe ->  tgt.drug_exposure_end_datetime = fpe,  tgt.drug_exposure_end_date = cast(fps, 'date');
  };
  src.effective : Period as s -> tgt then {
    s.end as fpe -> tgt.verbatim_end_date = cast(fps, 'date');
  };
  src.category : CodeableConcept as s -> tgt then {
    s.coding as sc -> tgt then {
      sc.code as a -> tgt.drug_type_concept_id = a;
    };
  };
  src.reason : CodeableReference as s -> tgt then {
    s.concept as scs -> tgt then {
      scs.coding as sc -> tgt then {
        sc.code as a -> tgt.stop_reason = a;
      };
    };
  };
}


Source

{
  "resourceType" : "StructureMap",
  "id" : "MedicationMap",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: StructureMap MedicationMap</b></p><a name=\"MedicationMap\"> </a><a name=\"hcMedicationMap\"> </a><pre class=\"fml\">\r\n<span style=\"color: #cc00cc\">/// <b>url</b> = </span><span style=\"color: blue\">'http://hl7.org/fhir/uv/omop/StructureMap/MedicationMap'</span>\r\n<span style=\"color: #cc00cc\">/// <b>name</b> = </span><span style=\"color: blue\">'MedicationMap'</span>\r\n<span style=\"color: #cc00cc\">/// <b>title</b> = </span><span style=\"color: blue\">'Mapping MedicationStatement resource to DrugExposure OMOP Domain'</span>\r\n<span style=\"color: #cc00cc\">/// <b>status</b> = </span><span style=\"color: blue\">'draft'</span>\r\n\r\n<b>uses</b><span style=\"color: navy\"> &quot;</span><a href=\"http://hl7.org/fhir/R5/medicationstatement.html\" title=\"MedicationStatement\">http://hl7.org/fhir/StructureDefinition/MedicationStatement</a><span style=\"color: navy\">&quot; </span><b>alias </b>MedState <b>as </b><b>source</b>\r\n<b>uses</b><span style=\"color: navy\"> &quot;</span><a href=\"StructureDefinition-DrugExposure.html\" title=\"Drug Exposure OMOP Table\">http://hl7.org/fhir/uv/omop/StructureDefinition/DrugExposure</a><span style=\"color: navy\">&quot; </span><b>alias </b>DrugExpTable <b>as </b><b>target</b>\r\n\r\n<b>group </b>MedExposure<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span><span style=\"color: navy\"> : </span>MedState, <b>target</b> <span style=\"color: maroon\">tgt</span><span style=\"color: navy\"> : </span>DrugExpTable<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> src.medication<span style=\"color: navy\"> : </span>CodeableReference<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -&gt; </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.concept<b> as </b><span style=\"color: maroon\">scs</span><span style=\"color: navy\"><b> -&gt; </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> scs.coding<b> as </b><span style=\"color: maroon\">sc</span><span style=\"color: navy\"><b> -&gt; </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sc.code<b> as </b><span style=\"color: maroon\">a</span><span style=\"color: navy\"><b> -&gt; </b></span>tgt.drug_concept_id = <span style=\"color: maroon\">a</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">src.id as id -&gt; tgt.drug_exposure_id = cast(id, &quot;integer&quot;);</span>\r\n src.effective<span style=\"color: navy\"> : </span>dateTime<b> as </b><span style=\"color: maroon\">edt</span><span style=\"color: navy\"><b> -&gt; </b></span> tgt.drug_exposure_start_datetime = <span style=\"color: maroon\">edt</span><span style=\"color: navy\">, </span> tgt.drug_exposure_start_date = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">edt</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'date'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n src.effective<span style=\"color: navy\"> : </span>Period<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -&gt; </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.start<b> as </b><span style=\"color: maroon\">fps</span><span style=\"color: navy\"><b> -&gt; </b></span> tgt.drug_exposure_start_datetime = <span style=\"color: maroon\">fps</span><span style=\"color: navy\">, </span> tgt.drug_exposure_start_date = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">fps</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'date'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n src.effective<span style=\"color: navy\"> : </span>Period<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -&gt; </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.end<b> as </b><span style=\"color: maroon\">fpe</span><span style=\"color: navy\"><b> -&gt; </b></span> tgt.drug_exposure_end_datetime = <span style=\"color: maroon\">fpe</span><span style=\"color: navy\">, </span> tgt.drug_exposure_end_date = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">fps</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'date'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n src.effective<span style=\"color: navy\"> : </span>Period<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -&gt; </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.end<b> as </b><span style=\"color: maroon\">fpe</span><span style=\"color: navy\"><b> -&gt; </b></span>tgt.verbatim_end_date = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">fps</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'date'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n src.category<span style=\"color: navy\"> : </span>CodeableConcept<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -&gt; </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.coding<b> as </b><span style=\"color: maroon\">sc</span><span style=\"color: navy\"><b> -&gt; </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sc.code<b> as </b><span style=\"color: maroon\">a</span><span style=\"color: navy\"><b> -&gt; </b></span>tgt.drug_type_concept_id = <span style=\"color: maroon\">a</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n src.reason<span style=\"color: navy\"> : </span>CodeableReference<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -&gt; </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.concept<b> as </b><span style=\"color: maroon\">scs</span><span style=\"color: navy\"><b> -&gt; </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> scs.coding<b> as </b><span style=\"color: maroon\">sc</span><span style=\"color: navy\"><b> -&gt; </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sc.code<b> as </b><span style=\"color: maroon\">a</span><span style=\"color: navy\"><b> -&gt; </b></span>tgt.stop_reason = <span style=\"color: maroon\">a</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span></pre></div>"
  },
  "extension" : [
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
      "valueCode" : "brr"
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
      "valueInteger" : 1,
      "_valueInteger" : {
        "extension" : [
          {
            "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
            "valueCanonical" : "http://hl7.org/fhir/uv/omop/ImplementationGuide/hl7.fhir.uv.omop"
          }
        ]
      }
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
      "valueCode" : "draft",
      "_valueCode" : {
        "extension" : [
          {
            "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
            "valueCanonical" : "http://hl7.org/fhir/uv/omop/ImplementationGuide/hl7.fhir.uv.omop"
          }
        ]
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  ],
  "url" : "http://hl7.org/fhir/uv/omop/StructureMap/MedicationMap",
  "version" : "0.1.0",
  "name" : "MedicationMap",
  "title" : "Mapping MedicationStatement resource to DrugExposure OMOP Domain",
  "status" : "draft",
  "date" : "2025-06-26T15:12:06+00:00",
  "publisher" : "HL7 International / Biomedical Research and Regulation",
  "contact" : [
    {
      "name" : "HL7 International / Biomedical Research and Regulation",
      "telecom" : [
        {
          "system" : "url",
          "value" : "http://www.hl7.org/Special/committees/rcrim"
        }
      ]
    }
  ],
  "description" : "MappingMedicationStatementresourcetoDrugExposureOMOPDomain",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
          "code" : "001",
          "display" : "World"
        }
      ]
    }
  ],
  "structure" : [
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/MedicationStatement",
      "mode" : "source",
      "alias" : "MedState"
    },
    {
      "url" : "http://hl7.org/fhir/uv/omop/StructureDefinition/DrugExposure",
      "mode" : "target",
      "alias" : "DrugExpTable"
    }
  ],
  "group" : [
    {
      "name" : "MedExposure",
      "input" : [
        {
          "name" : "src",
          "type" : "MedState",
          "mode" : "source"
        },
        {
          "name" : "tgt",
          "type" : "DrugExpTable",
          "mode" : "target"
        }
      ],
      "rule" : [
        {
          "name" : "medicationCodeableReference",
          "source" : [
            {
              "context" : "src",
              "type" : "CodeableReference",
              "element" : "medication",
              "variable" : "s"
            }
          ],
          "target" : [
            {
              "transform" : "copy",
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                }
              ]
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          ],
          "rule" : [
            {
              "name" : "concept",
              "source" : [
                {
                  "context" : "s",
                  "element" : "concept",
                  "variable" : "scs"
                }
              ],
              "target" : [
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                  "transform" : "copy",
                  "parameter" : [
                    {
                      "valueId" : "tgt"
                    }
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              "rule" : [
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                  "name" : "coding",
                  "source" : [
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                      "element" : "coding",
                      "variable" : "sc"
                    }
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                  "target" : [
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                  "rule" : [
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                      ],
                      "target" : [
                        {
                          "context" : "tgt",
                          "element" : "drug_concept_id",
                          "transform" : "copy",
                          "parameter" : [
                            {
                              "valueId" : "a"
                            }
                          ]
                        }
                      ]
                    }
                  ]
                }
              ]
            }
          ],
          "documentation" : "src.id as id -> tgt.drug_exposure_id = cast(id, \"integer\");"
        },
        {
          "name" : "effectiveDateTime",
          "source" : [
            {
              "context" : "src",
              "type" : "dateTime",
              "element" : "effective",
              "variable" : "edt"
            }
          ],
          "target" : [
            {
              "context" : "tgt",
              "element" : "drug_exposure_start_datetime",
              "transform" : "copy",
              "parameter" : [
                {
                  "valueId" : "edt"
                }
              ]
            },
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              "element" : "drug_exposure_start_date",
              "transform" : "cast",
              "parameter" : [
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        },
        {
          "name" : "effectivePeriod",
          "source" : [
            {
              "context" : "src",
              "type" : "Period",
              "element" : "effective",
              "variable" : "s"
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                  "context" : "tgt",
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                      "valueId" : "fps"
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              "type" : "Period",
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                      "valueId" : "fps"
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                      "valueString" : "date"
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          "name" : "categoryCodeableConcept",
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                    }
                  ],
                  "target" : [
                    {
                      "context" : "tgt",
                      "element" : "drug_type_concept_id",
                      "transform" : "copy",
                      "parameter" : [
                        {
                          "valueId" : "a"
                        }
                      ]
                    }
                  ]
                }
              ]
            }
          ]
        },
        {
          "name" : "reasonCodeableReference",
          "source" : [
            {
              "context" : "src",
              "type" : "CodeableReference",
              "element" : "reason",
              "variable" : "s"
            }
          ],
          "target" : [
            {
              "transform" : "copy",
              "parameter" : [
                {
                  "valueId" : "tgt"
                }
              ]
            }
          ],
          "rule" : [
            {
              "name" : "concept",
              "source" : [
                {
                  "context" : "s",
                  "element" : "concept",
                  "variable" : "scs"
                }
              ],
              "target" : [
                {
                  "transform" : "copy",
                  "parameter" : [
                    {
                      "valueId" : "tgt"
                    }
                  ]
                }
              ],
              "rule" : [
                {
                  "name" : "coding",
                  "source" : [
                    {
                      "context" : "scs",
                      "element" : "coding",
                      "variable" : "sc"
                    }
                  ],
                  "target" : [
                    {
                      "transform" : "copy",
                      "parameter" : [
                        {
                          "valueId" : "tgt"
                        }
                      ]
                    }
                  ],
                  "rule" : [
                    {
                      "name" : "code",
                      "source" : [
                        {
                          "context" : "sc",
                          "element" : "code",
                          "variable" : "a"
                        }
                      ],
                      "target" : [
                        {
                          "context" : "tgt",
                          "element" : "stop_reason",
                          "transform" : "copy",
                          "parameter" : [
                            {
                              "valueId" : "a"
                            }
                          ]
                        }
                      ]
                    }
                  ]
                }
              ]
            }
          ]
        }
      ]
    }
  ]
}

XIG built as of ??metadata-date??. Found ??metadata-resources?? resources in ??metadata-packages?? packages.